By "registered our marriage in the Philippines", do you mean that you and your husband filed the paperwork for the Report of Marriage (ROM) process?
Assuming you used the ROM paperwork in renewing your Philippine passport, you will likely have your married name listed on the passport in time for your visa interview. In that case, as far as your US immigration is concerned, there's no problem even if some of your documents (like your husband's military orders) still list your maiden name. For your US visa, file the DS-260 form using the name listed on your new passport, then list your maiden name under the section for "Other Names Used".
Also, if you need to renew your NBI clearance, make sure to list your maiden name in the AKA field.
